Difference between revisions of "Seagrass Zmu Genome"

From Applied Bioinformatics Group
Jump to: navigation, search
Line 25: Line 25:
  
 
The tab-deliminated text file for orthologous groups between five species can be downloaded from  
 
The tab-deliminated text file for orthologous groups between five species can be downloaded from  
:[http://appliedbioinformatics.com.au/download/Zmu_orthogroups.txt.tar.gz Orthogroups]
+
:[http://appliedbioinformatics.com.au/download/Zmu_v1_orthomclgroups.txt.tar.gz Orthogroups]

Revision as of 02:01, 26 April 2016

This page provides access to Zostera muelleri genome assembly and annotation data for the paper Lee et al. 2016.


The draft assembly can be downloaded from:

Scaffolds


The predicted genes in proteins, transcripts and CDS can be downloaded from:

Proteins
Transcripts
CDS


The gene models reported by MAKER in the format of gff can be downloaded from:

Gene_models


The domains annotation of predicted proteins in the format of gff can be downloaded from:

Domains_annotation


The tab-deliminated text file for orthologous groups between five species can be downloaded from

Orthogroups