Edmund Ling - Revision history

Appbio: Replaced content with "Alumni"

2013-10-21T02:12:47Z

Replaced content with "Alumni"

Appbio at 02:48, 17 September 2010

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Appbio at 02:45, 17 September 2010

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Appbio: /* Academic qualifications */

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‎Academic qualifications

Appbio: /* Publications */

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‎Publications

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‎Research

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‎Research

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← Older revision		Revision as of 02:12, 21 October 2013
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−		+	Alumni
−	~~==Research==~~
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−	My research interests are in metagenomics and organismal genomics. I also have interests in evolutionary and population genomics. During doctoral studies at the University of Oxford, I investigated the genetics of human susceptibility to tuberculosis and malaria.
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−	~~I am currently a Postdoctoral Research Fellow at the School of Land, Crop and Food Sciences,University of Queensland, Australia, working on bioinformatics and metagenomics.~~
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−	~~The research projects I am involved in are:~~
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−	~~1.Identification and characterisation of repetitive elements in the ''Brassica'' A genome.~~
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−	~~2.Comparative genomics of avirulence in the plant fungal pathogen, ''Leptosphaeria maculans'', in collaboration with Dr Jacqueline Batley (UQ).~~
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−	~~3.Coral Black Band Disease metagenomics, in collaboration with Dr David Bourne (AIMS).~~
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−	~~4.Bovine rumen metagenomics, in collaboration with Dr Justin Pachebat (Aberystwyth University).~~
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−	~~5.ARC linkage project on next-generation metagenomics, in collaboration with Biomatters Ltd (NZ).~~
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−	~~6.Bovine rumen and marsupial gut metagenomics, in collaboration with Prof Mark Morrison (CSIRO).~~
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−	~~7.Genetic susceptibility to schizophrenia, in collaboration with Prof Bryan Mowry (QBI, UQ).~~
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−	~~8.Genome of the coral, ''Acropora millepora'', in collaboration with AGRF, WEHI and JCU.~~
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−	~~I am also interested in:~~
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−	*Identification and characterisation of repetitive elements in genomes
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−	*Phylogeny and evolution of transposable elements in the Brassicaceae
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−	*Coral metagenomics
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−	*Canola-associated soil metagenomics
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−	*Host-pathogen co-evolution in tuberculosis
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−	*The genomics of longevity in Teleosts
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−	~~==Publications==~~
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−	~~'''Books'''~~
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−	*'''Edmund Y S Ling''', 2009. Host genetic susceptibility to tuberculosis and malaria in Africa. Verlag Dr. Müller, Saarbrücken, Germany.
−	*http://www.amazon.co.uk/genetic-susceptibility-tuberculosis-malaria-Africa/dp/3639153103/ref=sr_1_1?ie=UTF8&s=books&qid=1262654947&sr=8-1
−
−
−	~~'''Journal articles'''~~
−	*Chiea C. Khor, Stephen J. Chapman, Fredrik O Vannberg, Aisling Dunne, Caroline Murphy, '''Edmund Y Ling''', Luke A J O’Neill, Adrian V. S. Hill et al, 2007. A Mal functional variant is associated with protection against invasive pneumococcal disease, bacteremia, malaria and tuberculosis. Nat Genet 39:523-528.
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−	*Zerjal, T, A Pandya, K Thangaraj, '''EYS Ling''', J Kearley, S Bertoneri, S Paracchini, L Singh, C Tyler-Smith, 2007. Y-chromosomal insights into the genetic impact of the caste system in India. Hum Genet 121:137-144.
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−	*Nasidze I, '''Ling EYS''', Quinque D, Dupanloup I, Cordaux R, Rychkov S, Naumova O, Zhukova O, Sarraf-Zadegan N, Naderi GA, Asgary S, Sardas S, Farhud DD, Sarkisian T, Asadov C, Kerimov A, Stoneking M, 2004. Mitochondrial DNA and Y-chromosome variation in the Caucasus. Ann Hum Genet 68:205-221.
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−	*Jamieson, BGM, S Tillier, A Tillier, J-L Justine, '''E Ling''', S James, K McDonald, A Hugall, 2002. Phylogeny of the Megascolecidae and Crassiclitellata (Annelida, Oligochaeta): combined versus partitioned analysis using nuclear (28S) and mitochondrial (12S, 16S) rDNA. Zoosystema 24(4):707.
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−
−	~~'''Conference papers'''~~
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−	*'''Edmund Y S Ling'''. The HapMap and candidate gene association studies in West Africa. The 8th International Meeting on Human Genome Variation and Complex Genome Analysis, Hong Kong, SAR, China. 14–16 September 2006.
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−	*'''Edmund Y S Ling'''. Patterns of Y chromosome evolution in the TBGENENV case-control study of Tuberculosis in West Africa. 11th International Congress of Human Genetics, Brisbane, Australia. 6-10 August 2006.
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−	~~'''Others'''~~
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−	*'''Ling, EYS''', 1995. Mitochondrial DNA systematics of the Megascolecidae (Oligochaeta). ''Unpublished BSc (Hons) thesis''.
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−
−	~~==Academic qualifications==~~
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−	*2008 Doctor of Philosophy, Clinical Medicine, University of Oxford, UK.
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−	*1995 Bachelor of Science, Postgraduate Honours (First Class), Zoology, University of Queensland, Brisbane, Australia.
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−	*1993 Bachelor of Science, Zoology, University of Queensland, Brisbane, Australia.

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	==Research==		==Research==

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	==Research==		==Research==

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	==Research==		==Research==

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	*'''Ling, EYS''', 1995. Mitochondrial DNA systematics of the Megascolecidae (Oligochaeta). ''Unpublished BSc (Hons) thesis''.		*'''Ling, EYS''', 1995. Mitochondrial DNA systematics of the Megascolecidae (Oligochaeta). ''Unpublished BSc (Hons) thesis''.
		+

	==Academic qualifications==		==Academic qualifications==

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 *The genomics of longevity in Teleosts
 ==Publications==
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 *'''Ling, EYS''', 1995. Mitochondrial DNA systematics of the Megascolecidae (Oligochaeta). ''Unpublished BSc (Hons) thesis''.
 ==Academic qualifications==

@@ Line 10: / Line 10: @@
 .Identification and characterisation of repetitive elements in the ''Brassica'' A genome.
 .Comparative genomics of avirulence in the plant fungal pathogen, ''Leptosphaeria maculans'', in collaboration with Dr Jacqueline Batley (UQ).
 .Coral Black Band Disease metagenomics, in collaboration with Dr David Bourne (AIMS).
 .Bovine rumen metagenomics, in collaboration with Dr Justin Pachebat (Aberystwyth University).
 .ARC linkage project on next-generation metagenomics, in collaboration with Biomatters Ltd (NZ).
 .Bovine rumen and marsupial gut metagenomics, in collaboration with Prof Mark Morrison (CSIRO).
 .Genetic susceptibility to schizophrenia, in collaboration with Prof Bryan Mowry (QBI, UQ).
 .Genome of the coral, ''Acropora millepora'', in collaboration with AGRF, WEHI and JCU.

@@ Line 6: / Line 6: @@
-More specifically, I am interested in:
+The research projects I am involved in are:
 *Identification and characterisation of repetitive elements in genomes
@@ Line 14: / Line 27: @@
 *Canola-associated soil metagenomics
 *Host-pathogen co-evolution in tuberculosis

← Older revision		Revision as of 02:11, 17 September 2010
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	'''Journal articles'''		'''Journal articles'''
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−	*'''Edmund Y S Ling''', Adrian V S Hill et al., 2009. No evidence of MCP1 and TICAM2 association with tuberculosis in The Gambia. ''In prep''.
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−	*'''Edmund Y S Ling''', Adrian V S Hill et al., 2009. The pyruvate kinase (liver and red blood cell), B and T lymphocyte attenuator, and TIR domain-containing adaptor molecule 2 genes, and association with malaria in Gambians. ''In prep''.
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−	*'''Edmund Y S Ling''', Chris Tyler-Smith, Adrian V S Hill et al., 2009. Chromosome Y and mitochondrial DNA population genetics of humans in West Africa. ''In prep''.
−
	*Chiea C. Khor, Stephen J. Chapman, Fredrik O Vannberg, Aisling Dunne, Caroline Murphy, '''Edmund Y Ling''', Luke A J O’Neill, Adrian V. S. Hill et al, 2007. A Mal functional variant is associated with protection against invasive pneumococcal disease, bacteremia, malaria and tuberculosis. Nat Genet 39:523-528.		*Chiea C. Khor, Stephen J. Chapman, Fredrik O Vannberg, Aisling Dunne, Caroline Murphy, '''Edmund Y Ling''', Luke A J O’Neill, Adrian V. S. Hill et al, 2007. A Mal functional variant is associated with protection against invasive pneumococcal disease, bacteremia, malaria and tuberculosis. Nat Genet 39:523-528.